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People
Giuseppe Jurman
Position
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Senior Researcher |
Current site of work |
Fondazione Bruno Kessler |
Street, number |
via Sommarive 18 |
City |
Povo (Trento) |
Postal code |
38100 |
Country |
Italy |
E-mail |
jurman@fbk.eu |
Phone |
+39 0461 314 523 |
Mobile phone |
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Degree, Msc, or PhD; when; where; on what subject; title of the thesis |
Ph.D.; 2nd November 1998; University of Trento; Mathematics; "On graded Lie algebras in characteristic two" |
Expertise |
Bioinformatics; Machine Learning; Mathematical Modeling |
Professional societies |
UMI (Unione Matematica Italiana); Indam-GNSAGA (Istituto Nazionale di Alta Matematica, Gruppo Nazionale Strutture Algebrico-Geometriche e loro Applicazioni); GIRPR (Gruppo Italiano Ricercatori in Pattern Recognition) |
Research experience, training, professional stages |
Jan06 – present: Senior Researcher at FBK – MPBA
Jan03 - Dec05: PostDoc Fellow at FBK - MPBA
Jun01 - Dec02: PostDoc Fellow at University of Trento, Department of Mathematics
Feb01 - Jun01: Programmer at Netwise, snc
Feb99 - Feb01: PostDoc Fellow at CMA, Australian National University (Canberra) |
Website |
http://mpba.fbk.eu/jurman |
Current research area |
Machine learning for functional genomics; mathematical methods for computational biology; group theory |
Publication List (last five years):
J.P.A. Ioannidis, D.B. Allison, C.A. Ball, I. Coulibaly, X. Cui, A.C. Culhane, M. Falchi, C. Furlanello, L. Game, G. Jurman, T. Mehta, J. Mangion, M. Nitzberg, G.P. Page, E. Petretto, V. van Noort Repeatability of published microarray gene expression analyses Nature Genetics, 41(2), 499-505, 2009
A. Barla, G. Jurman, S. Riccadonna, M. Chierici, S. Merler, C. Furlanello Machine learning methods for predictive proteomics Briefings in Bioinformatics, 9(2), 119-128, 2008
G. Jurman, S. Merler, A. Barla, S. Paoli, A. Galea, C. Furlanello Algebraic stability indicators for ranked lists in molecular profiling Bioinformatics, 24(2), 258-264, 2008
S.Paoli, G. Jurman, D. Albanese, S. Merler and C. Furlanello Integrating gene expression profiling and clinical data International Journal of Approximate Reasoning, 47(1), 58-69, 2008
S. Riccadonna, G. Jurman, S. Merler, S. Paoli, A. Quattrone, C. Furlanello Supervised classification of combined copy number and gene expression data Journal of Integrative Bioinformatics, 4(3):74, 177-188, 2007
M. Cannataro, A. Barla, R. Flor, A. Gallo, G. Jurman, S. Merler, S. Paoli, G. Tradigo, P. Veltri and C. Furlanello A grid environment for high-throughput proteomics IEEE Trans. Nanobiosciences, 6(2), 117-123, 2007
G. Jurman, A. Barla, S. Riccadonna, C. Furlanello Classificazione predittiva per il profiling proteomico Genomica e Proteomica Computazionale, 26, 227--244, Patron ed., 2007
S. Merler, M. Ajelli, G. Jurman, C. Furlanello, C. Rizzo, A. Bella, M. Massari, M.L. Ciofi degli Atti Modeling influenza pandemic in Italy: an individual based approach Proceedings of SIS 2007, 2007
S. Merler, G. Jurman and C. Furlanello Deriving the kernel from training data Proceedings of MCS 2007, Lecture Notes in Computer Science 4472, 72-81. Springer, 2007
S. Merler, G. Jurman, C. Furlanello, C. Rizzo, M. Massari, A. Bella and M.L. Ciofi degli Atti Strategies for containing an influenza pandemic: the case of Italy Proceedings of IEEE Bio-Inspired Models of Network, Information and Computing Systems, 1ed, 1-7,2007
S. Merler and G. Jurman Terminated Ramp - Support Vector Machine: a nonparametric data dependent kernel Neural Network, 19(10), 1597-1611, 2006
C. De Pittà, L. Tombolan, G. Albiero, F. Sartori, C. Romualdi, G. Jurman, M. Carli, C. Furlanello, G. Lanfranchi and A. Rosolen Gene expression profiling identifies potential relevant genes in alveolar rhabdomyosarcoma pathogenesis and discriminates PAX3-FKHR positive and negative tumors Int. J. Cancer, 118(11), 2772-2781, 2006
C. Furlanello, S. Merler and G. Jurman Combining feature selection and DTW for time-varying functional genomics IEEE Transactions on Signal Processing, 54(6 Pt 2), 2436-2443, 2006
S.Paoli, G. Jurman, D. Albanese, S. Merler and C. Furlanello Semisupervised profiling of gene expression and clinical data Fuzzy Logic and Applications: 6th International Workshop, WILF 2005, Crema, Italy, September 15-17, 2005, Revised Selected Papers (Eds:I. Bloch, A. Petrosino, A.G.B. Tettamanzi), Lecture Notes in Computer Science 3849, 284-289, Springer, 2006
A.Barla, B.Irler, S.Merler, G. Jurman, S.Paoli and C. Furlanello Proteome profiling without selection bias Proceedings of the 19th IEEE Symposium on Computer-Based Medical Systems (CBMS 2006), 22-23 June 2006, Salt Lake City, US, 941—946, 2006
C. Furlanello, M. Serafini, S. Merler and G. Jurman Semisupervised learning for molecular profiling IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2(2), 110-118, 2005
S. Merler, C. Furlanello and G. Jurman Machine learning on historic air photographs for mapping risk of unexploded bombs In F. Roli, S. Vitulano (eds), Proceedings of ICIAP2005, Lecture Notes in Computer Science 3617, 735-742. Springer, 2005
G. Jurman Graded Lie algebras of maximal class III Journal of Algebra, 284, 435-461, 2005
B. Caprile, S. Merler, C. Furlanello, and G. Jurman Exact bagging with k-nearest neighbour classifiers In F. Roli, J. Kittler, T. Windeatt (eds), Proceedings of MCS 45/2003, Lecture Notes in Computer Science 3077, 72-81. Springer, 2004
C. Furlanello, M. Serafini, S. Merler, and G. Jurman Methods for predictive classification and molecular profiling from DNA microarray data Proceedings of The New Frontiers of Arrhythmias 2004, Ital. Heart J., 5(1), 199-202, 2004 G. Jurman A family of simple Lie algebras in characteristic two Journal of Algebra, 271, 454-481, 2004
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